Publications

The students of the Department have co-authored research papers published in high impact factor journals of international repute, and presented their work in national and international conferences.

PUBLICATIONS OF THE STUDENT OF GENETIC ENGINEERING 

1.  M.K. Harishankar, S. Logeshwaran, S. Sujeevan, K.N. Aruljothi, M.A. Dannie, A. Devi (2015) Genotoxicity evaluation of metformin and glimepiride by micronucleus assay in exfoliated urothelial cells of type 2 diabetes mellitus patients. Food and Chemical Toxicology 83, 146–150.

2. M. K. Harishankar, C. Sasikala and M. Ramya: Efficiency of the intestinal bacteria in the degradation of the toxic pesticide, chlorpyrifos. 3 Biotech, Online First™, 31 July 2012

3. Purushothaman Natarajan, Kanagasabapathy D, Gunadayalan G, Panchalingam J, Shree N, Sugantham PA, Singh KK, Madasamy P: Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds. BMC Genomics 2010, 11:606. 

4. Ramya M, Iyappan S, Manju A, Jiffe JS (2010) Biodegradation and Decolorization of Acid Red by Acinetobacter radioresistens. J Bioremed Biodegrad1:105. doi:10.4172/2155-6199.1000105

5. Devadas Samyukthaa, Rathinasabapathi .P (2013) On Field Detection of White Spot Syndrome Virus (WSSV) infected Shrimp using Loop Mediated Isothermal Amplification. Research Journal of Biotechnology 8:6, 13-17.

6. Manoj Kumar Narasimhan, Shenoy K Pavithra, Vishnupriya Krishnan, Muthukumaran Chandrasekaran (2013) In vitro Analysis of Antioxidant, Antimicrobial and Antiproliferative Activity of Enteromorpha antenna, Enteromorpha linza and Gracilaria corticata Extracts. Jundishapur J Nat Pharm Prod. 8:4, 151-9.

7. Radha S, Aliya Fatima, Iyyappan S, Ramya M, (2013) Direct colony PCR for rapid identification of varied microalgae from fresh water environment, Journal of Applied Phycology 2,  609-613.  Impact Factor 2.414

PUBLICATIONS OF THE FACULTY OF GENETIC ENGINEERING

Rathinasabapathi P, Purushothaman N, Ramprasad VL, Parani M. (2015) Whole genome sequencing and analysis of Swarna, a widely cultivated indica rice variety with low glycemic index. Nature Scientific Reports. 5: 11303; DOI: 10.1038/srep11303 . (Impact factor 5.7)

Rathinasabapathi. P, Deepak S Hiremath, Rex Arunraj and Parani. M. (2015) Molecular detection of New Delhi Metallo-beta-Lactamase-1 (NDM-1) positive bacteria from environmental and drinking water samples by Loop mediated Isothermal Amplification of bla_NDM-1. Indian Journal of Microbiology. DOI 10.1007/s12088-015-0540-x

Vassoua SL,  Kusuma G, Parani M (2015) DNA barcoding for species identification from dried and powdered plant parts: A case study with authentication of the raw drug market samples of Sida cordifolia. Gene. DOI:10.1016/j.gene.2015.01.025

Gayathri Devi S,  Aliya Fathima A,  Radha S, Rex Arunraj, Wayne R. Curtis,  Ramya M (2015) A rapid and economical method for efficient DNA extraction from diverse soils suitable for metagenomic applications, Plos One,  DOI: 10.1371/journal.pone.0132441. Impact Factor 3.2

S Gayathri Devi and M Ramya (2015) PCR- RFLP based Bacterial Diversity Analysis of a Municipal Sewage Treatment Plant. Journal of Environmental Biology, Impact Factor 0.7 Accepted In press

Trevor R Zuroff, Andrew C Tolonen, Mohandass Ramya, Wayne R Curtis (2015) Physiology, genomics, and pathway engineering of an ethanol tolerant strain of Clostridium phytofermentans. Applied and Environmental Microbiology . Accepted manuscript posted online 5 June 2015, doi:10.1128/AEM.00619-15 , Impact factor 3.9

M.K. Harishankar, S. Logeshwaran, S. Sujeevan, K.N. Aruljothi, M.A. Dannie, A. Devi (2015) Genotoxicity evaluation of metformin and glimepiride by micronucleus assay in exfoliated urothelial cells of type 2 diabetes mellitus patients. Food and Chemical Toxicology 83, 146–150.

Nagarajan ArulJothi , Devi Arikketh , Melvin George, S.Elangovan , R.A Whitall , S.E Humphries (2014), Effect of novel intronic mutation c.694+8_694+18del in LDLR gene in the pathogenicity of FH, Indian Journal of Human Genetics.

Rohit Y. Sathe, Seema A. Kulkarni, Raja Natesan Sella, Thirumurthy Madhavan (2015 ) Computational identification of JAK2 inhibitors: a combined pharmacophore mapping and molecular docking approach. Medicinal Chemistry Research 24,1449–146.

B. Usha, Devivasha B and Ajay Parida (2015) Diverse expression of sucrose transporters in Zea mays  Journal of Genetics, 94:1, 151-154.

SK Sharma, PV Kumar, AS Geetanjali, KB Pun, VK Baranwal (2015) Subpopulation level variation of banana streak viruses in India and common evolution of banana and sugarcane badnaviruses Virus genes 1-16.                                  

Nithaniyal S, Newmaster SG, Ragupathy S, Krishnamoorthy D, Sophie LV, Parani M (2014) DNA Barcode Authentication of Wood Samples of Threatened and Commercial Timber Trees within the Tropical Dry Evergreen Forest of India. PLoS ONE 9(9): e107669.

Nagasathiya K, Brinda C, Parani M, Vairamani M (2014) Artifacts from methanol stored in borosilicate glass bottle during electrospray ionization mass spectral analysis. Rapid Communications in Mass Spectrometry 28:20, 2227-30.

Purushothaman N, Newmaster SG, Ragupathy S, Stalin N, Suresh D, Arunraj DR, Gnanasekaran G, Vassou SL, Narasimhan D, Parani M (2014) A tiered barcode authentication tool to differentiate medicinal Cassia species in India. Genetic and Molecular Research 13(2): 2959-68.

Purushothaman N, Parani M (2014) First complete genome sequence of a probiotic Enterococcus faecium strain T-110 and its comparative genome analysis with pathogenic and non-pathogenic Enterococcus faecium genomes. Journal of Genetics and Genomics 42 :1, 43-46. (Impact factor 3.0)

Yadav A, Parida D, Muralidharan A. Ramya M (2014 )Bioelectricity generation by proton exchange membrane-based microbial fuel cell from sewage substrate, Current Science 29: 106 (01).

Mary Sanitha, Radha S, Aliya Fathima A, Gayathri Devi S and Ramya M (2014) Agrobacterium-Mediated Transformation of Three Freshwater Microalgal Strains. Polish Journal of Microbiology,63(4):387-392.

Rex Arunraj, Bindu Sree, Parani (2014) Desiccation and topping induced silencing of putrescine N-methyl transferase2 regulate nicotine biosynthesis in Nicotiana tabacum cv. Petite Havana. Australian journal of crop science  8:1),109-118.

Anitha. C, Sujatha.K, Rajnish. N, Santosh. A, Padma Krishnan, Senthilkumar.S, Vincent.S, Sivasankari.S, Gunasekaran. P, Rajasekharan. S, Pushpakala. M (2014) Molecular Characterization of Pseudomonas sp. isolated from lower respiratory tract infection in HIV and non HIV population by 16S rDNA and ARDRA,BMC Infectious Diseases, 17.

M.Suganthi, P. Senthilkumar, S.Arvinth, R. Raj Kumar and K.N.Chandrashekara (2014) RAPD and SCAR Marker Linked to Tea-Mosquito Resistance in Tea. Journal of Crop Improvement. 28:6, 795-803.

Senthilkumar Palanisamy and Mandal Abul kalam Azad (2014)  Susceptibility against grey blight disease causing fungus Pestalotipsis sp. In tea (Camellia sinensis (L). O.Kunteze cultivars is influenced by anti oxidative enzymes. Applied Biochemistry and Biotechnology. 172:1, 216-223

SK Sharma, PV Kumar, R Poswal, R Rai, AS Geetanjali, K Prabha, RK Jain, VK Baranwal  (2014) Occurrence and distribution of banana streak disease and standardization of a reliable detection procedure for routine indexing of banana streak viruses in India,Scientia Horticulturae 179, 277-283. 

J.Megala & A. Geetha (2014) Effect of Pithecellobium dulce on cysteamine induced duodenal ulcer in rats,(2014)Indian Journal of Experimental Biology ,Accepted, In Press .

Deepa K, Rodionov RN, Weiss N, Parani M (2013) Transgenic expression and functional characterization of human platelet derived growth factor BB (hPDGF-BB) in tobacco (Nicotiana tabacum L.). Applied Biochemistry and Biotechnology 171:6,1390-404

Liu D, Liu L, Guo G, Wang W, Sun Q, Parani M, Ma J (2013) BOLDMirror: a global mirror system of DNA barcode data. Molecular Ecology Resources 13:6, 991-5.

Radha S, Aliya Fatima, Iyyappan S, Ramya M, (2013) Direct colony PCR for rapid identification of varied microalgae from fresh water environment, Journal of Applied Phycology 2,  609-613.  Impact Factor 2.414

Hong, E., Santhakumar, K., Akitake, C.M., Ahn, S.J., Thisse, C., Thisse, B., Wyart, C., Mangin, J-M. and M.E. Halpern , 2013 Cholinergic left-right asymmetry in the habenulo-interpeduncular pathway. Proceedings of National Academy of Sciences, USA 110, 21171-6. 

Manoj Kumar Narasimhan, Shenoy K Pavithra, Vishnupriya Krishnan, Muthukumaran Chandrasekaran (2013) In vitro Analysis of Antioxidant, Antimicrobial and Antiproliferative Activity of Enteromorpha antenna, Enteromorpha linza and Gracilaria corticata Extracts. Jundishapur J Nat Pharm Prod. 8:4, 151-9.

Devadas Samyukthaa, Rathinasabapathi .P (2013) On Field Detection of White Spot Syndrome Virus (WSSV) infected Shrimp using Loop Mediated Isothermal Amplification. Research Journal of Biotechnology 8:6, 13-17.